- Aliuanay Creek, a stream
- Anongo in Northern Samar, Eastern Visayas
- Anopog, population 2,700 in Province of Negros Oriental, Central Visayas
- Babas Cove, a cove in Province of Surigao del Norte, Caraga
- Bagtong in Eastern Samar, Eastern Visayas
- Bangac in Province of Iloilo, Western Visayas
- Barra, population 2,084 in Province of Masbate, Bicol
- Barrabas Reef, a reef in Province of Surigao del Norte, Caraga
- Barraca in Province of Cebu, Central Visayas
- Binibulang in Province of Leyte, Eastern Visayas
- Bombon Point, a point in Province of Surigao del Norte, Caraga
- Boyog Point, a cape in Province of Samar, Eastern Visayas
- Bungol Creek, a stream in Province of Negros Occidental, Western Visayas
- Cagbonga in Eastern Samar, Eastern Visayas
- Calanay River, a stream in Province of Masbate, Bicol
- Cansambag in Province of Bohol, Central Visayas
- Capulan Hill, a hill in Province of Iloilo, Western Visayas
- Casigpitan River, a stream in Province of Zamboanga del Sur, Zamboanga Peninsula
- Catigbian in Northern Samar, Eastern Visayas
- Comatin in Province of Leyte, Eastern Visayas
- Cueva in Province of Zamboanga del Sur, Zamboanga Peninsula
- Egut River, a stream in Province of Samar, Eastern Visayas
- Fama in Province of Zamboanga del Sur, Zamboanga Peninsula
- Garrido in Southern Leyte, Eastern Visayas
- Hacienda San Roque in Province of Negros Occidental, Western Visayas
- Hinunangan in Hinunangan, Southern Leyte, Eastern Visayas
- Hinunangan Bay, a bay in Southern Leyte, Eastern Visayas
- Hinundayan, population 2,693 in Hinundayan, Southern Leyte, Eastern Visayas
- Hinundayan Cove, a cove in Southern Leyte, Eastern Visayas
- Hinundayan River, a stream in Southern Leyte, Eastern Visayas
- Inas Basan, a depression in Province of Maguindanao, Autonomous Region in Muslim Mindanao
- Inatan Creek, a stream in Province of Samar, Eastern Visayas
- Inatian in Province of Maguindanao, Autonomous Region in Muslim Mindanao
- Kalinan Creek, a stream
- Kapatagan in Province of North Cotabato, Soccsksargen
- Kulapu River, a stream in Province of Davao del Sur, Davao
- Kulasi in Province of Maguindanao, Autonomous Region in Muslim Mindanao
- Lebak in Province of Sultan Kudarat, Soccsksargen
- Mabini in Province of Surigao del Norte, Caraga
- Magon
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- Makam Hill, a hill in Province of Sulu, Autonomous Region in Muslim Mindanao
- Matno Hill, a hill in Province of Capiz, Western Visayas
- Mount Agsubay, a hill in Province of Iloilo, Western Visayas
- Mount Allia, a hill in Province of Sulu, Autonomous Region in Muslim Mindanao
- Mount Apo National Park, a park in Province of North Cotabato, Soccsksargen
- Mount Dinulman, a hill in Province of Guimaras, Western Visayas
- Mount Duluan, a hill in Province of Capiz, Western Visayas
- Mount Magolo, a mountain in Province of South Cotabato, Soccsksargen
- Mount Musugbu, a hill in Province of Iloilo, Western Visayas
- Palina in Province of Iloilo, Western Visayas
- Pangdan in Southern Leyte, Eastern Visayas
- Pasil in Province of Sulu, Autonomous Region in Muslim Mindanao
- Perez Hill Range, a hill in Province of Maguindanao, Autonomous Region in Muslim Mindanao
- Pinalim in Province of Zamboanga del Sur, Zamboanga Peninsula
- Pongapong in Province of Zamboanga del Sur, Zamboanga Peninsula
- Pongca Bay, a bay in Province of Zamboanga del Sur, Zamboanga Peninsula
- Port Lebak, a port in Province of Sultan Kudarat, Soccsksargen
- Puyo Rock, a rock in Province of Surigao del Norte, Caraga
- Pyramidal Rock, a rock in Eastern Samar, Eastern Visayas
- Rosario Rock, a rock in Province of Guimaras, Western Visayas
- Sagay in Province of Zamboanga del Sur, Zamboanga Peninsula
- Salvacion, population 6,090 in Province of Davao del Norte, Davao
- San Roque Hacienda
- San Roque River, a stream in Southern Leyte, Eastern Visayas
- San Rufino
- Shallow Lagoon, a lagoon in Province of Tawi-Tawi, Autonomous Region in Muslim Mindanao
- Siotan in Province of Zamboanga del Sur, Zamboanga Peninsula
- Sogod Cemetery in Southern Leyte, Eastern Visayas
- Sulat Bay, a bay in Eastern Samar, Eastern Visayas
- Sulat River, a stream in Eastern Samar, Eastern Visayas
- Taft, population 4,421 in Taft, Eastern Samar, Eastern Visayas
- Tagluno River, a stream
- Talipao in Province of Sulu, Autonomous Region in Muslim Mindanao
- Tamoac Creek, a stream in Province of Sultan Kudarat, Soccsksargen
- Tanggul Creek, a stream in Province of Sultan Kudarat, Soccsksargen
- Tangnan in Province of Bohol, Central Visayas
- Tulac in Province of Samar, Eastern Visayas
- Tulag in Province of Sulu, Autonomous Region in Muslim Mindanao
- Valderrama in Province of Iloilo, Western Visayas
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