- Aslum in Province of Leyte, Eastern Visayas
- Balugan Stream, a stream in Province of North Cotabato, Soccsksargen
- Bandang in Province of Sulu, Autonomous Region in Muslim Mindanao
- Banga River, a stream in Province of Sultan Kudarat, Soccsksargen
- Basiao Channel, a marine channel in Province of Bohol, Central Visayas
- Basiao Cove, a cove in Province of Masbate, Bicol
- Basiawan in Province of Davao del Sur, Davao
- Basiawan Bay, a bay in Province of Davao del Sur, Davao
- Beyobo Channel, a marine channel in Province of Surigao del Norte, Caraga
- Binuang, population 3,159 in Province of Sulu, Autonomous Region in Muslim Mindanao
- Blake Reef, a reef in Province of Tawi-Tawi, Autonomous Region in Muslim Mindanao
- Blanca Aurora in Province of Samar, Eastern Visayas
- Buan Island, an island in Province of Tawi-Tawi, Autonomous Region in Muslim Mindanao
- Buan Point, a point in Province of Davao Oriental, Davao
- Buangen Mahaba in Province of Sulu, Autonomous Region in Muslim Mindanao
- Buluanga in Northern Samar, Eastern Visayas
- Buluangan in Province of Guimaras, Western Visayas
- Cabanbanan Hacienda in Province of Negros Occidental, Western Visayas
- Cagioguinog in Northern Samar, Eastern Visayas
- Caglagting in Province of Samar, Eastern Visayas
- Caglanipan River, a stream
- Cangbukag in Province of Bohol, Central Visayas
- Chongos Bay, a bay in Province of Tawi-Tawi, Autonomous Region in Muslim Mindanao
- Christensen in Province of Davao del Sur, Davao
- Ciabo in Province of Leyte, Eastern Visayas
- Cibucao Creek, an intermittent stream in Province of Negros Occidental, Western Visayas
- Culob in Province of Iloilo, Western Visayas
- Culub in Province of Iloilo, Western Visayas
- Dapayan in Province of Zamboanga del Sur, Zamboanga Peninsula
- Darapuay Stream, a stream in Province of North Cotabato, Soccsksargen
- Escalante, population 39,177 in Escalante, Province of Negros Occidental, Western Visayas
- Escalante Bay, a bay in Province of Negros Occidental, Western Visayas
- Escalante Harbor, a harbor in Province of Negros Occidental, Western Visayas
- Gulangan in Province of Sulu, Autonomous Region in Muslim Mindanao
- Hacienda Abo Abo in Province of Negros Occidental, Western Visayas
- Hacienda Biac in Province of Negros Occidental, Western Visayas
- Ilajas in Province of Iloilo, Western Visayas
- Ipil in Province of Tawi-Tawi, Autonomous Region in Muslim Mindanao
- Javier, population 2,276 in Province of Surigao del Sur, Caraga
- Kanihaan Island, an island in Province of Surigao del Norte, Caraga
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- Kanikian Point, a point in Province of Davao Oriental, Davao
- Langayen in Province of North Cotabato, Soccsksargen
- Mambusay in Province of Negros Occidental, Western Visayas
- Manuel Roxas, population 4,482 in Province of South Cotabato, Soccsksargen
- Manuganaga in Province of Masbate, Bicol
- Matatal in Province of Sulu, Autonomous Region in Muslim Mindanao
- Navais
- Naval in Province of Leyte, Eastern Visayas
- Orong, population 6,772 in Province of Negros Occidental, Western Visayas
- Panglimasan River, a stream in Province of Davao Oriental, Davao
- Pangliogan in Province of Bohol, Central Visayas
- Panlaya-an River, an intermittent stream in Province of Negros Oriental, Central Visayas
- Pinay Creek, a stream in Province of Iloilo, Western Visayas
- Pinayagan Norte, population 4,498 in Province of Bohol, Central Visayas
- Pinayagan Sur in Province of Bohol, Central Visayas
- Puisant in Province of Leyte, Eastern Visayas
- Pujada Bay, a bay in Province of Davao Oriental, Davao
- Pujada Island, an island in Province of Davao Oriental, Davao
- Remedio
- Sali in Province of Davao del Norte, Davao
- San Florentino in Province of Iloilo, Western Visayas
- San Lucas in Province of Iloilo, Western Visayas
- Santa Cruz
- Silago, population 2,276 in Silago, Southern Leyte, Eastern Visayas
- Silago River, a stream in Southern Leyte, Eastern Visayas
- Sitagan in Province of Iloilo, Western Visayas
- South Ubian in Province of Tawi-Tawi, Autonomous Region in Muslim Mindanao
- South Upi, population 12,538 in South Upi, Province of Maguindanao, Autonomous Region in Muslim Mindanao
- South Valencia in Province of Iloilo, Western Visayas
- Tabucan in Province of Samar, Eastern Visayas
- Tambak Creek, an intermittent stream in Province of Sulu, Autonomous Region in Muslim Mindanao
- Tanguip Point, a point in Province of Davao Oriental, Davao
- Tigbao in Province of Leyte, Eastern Visayas
- Tigbao River, a stream in Province of Negros Occidental, Western Visayas
- Tigbauan River, a stream in Province of Iloilo, Western Visayas
- Totagay in Province of Davao del Sur, Davao
- Totay in Eastern Samar, Eastern Visayas
- Ungus-Ungus, population 2,344 in Province of Tawi-Tawi, Autonomous Region in Muslim Mindanao
- Wason in Province of Davao Oriental, Davao
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