- Agbagacay in Province of Negros Occidental, Western Visayas
- Agbahoan
- Alugan Bay, a bay in Eastern Samar, Eastern Visayas
- Bad-ang in Province of Surigao del Norte, Caraga
- Badak in Province of South Cotabato, Soccsksargen
- Badao in Province of Maguindanao, Autonomous Region in Muslim Mindanao
- Badas in Province of Surigao del Norte, Caraga
- Balandra River, a stream in Province of Iloilo, Western Visayas
- Bare Hill, a hill in Province of Iloilo, Western Visayas
- Binonga
- Bolonakan in Province of Maguindanao, Autonomous Region in Muslim Mindanao
- Bongtud in Eastern Samar, Eastern Visayas
- Bongued, population 2,684 in Province of Maguindanao, Autonomous Region in Muslim Mindanao
- Bujong Sanglay in Province of Masbate, Bicol
- Buka in Province of Davao del Sur, Davao
- Buka Buka in Province of Sulu, Autonomous Region in Muslim Mindanao
- Cabundoc in Province of North Cotabato, Soccsksargen
- Calawag in Province of North Cotabato, Soccsksargen
- Camasi in Province of Sarangani, Soccsksargen
- Cap Island, an island in Province of Sulu, Autonomous Region in Muslim Mindanao
- Capio-an in Province of Cebu, Central Visayas
- Capisolon Creek, an intermittent stream in Province of Davao del Sur, Davao
- Capisolon Point, a point in Province of Davao del Sur, Davao
- Copton Bay, a bay in Province of Cebu, Central Visayas
- Copton Peninsula, a peninsula in Province of Cebu, Central Visayas
- Dalugdug Point, a cape in Province of Samar, Eastern Visayas
- Damita Rock, a rock
- Duludin in Province of Sultan Kudarat, Soccsksargen
- Duluguin Point, a cape in Province of Zamboanga del Norte, Zamboanga Peninsula
- Dulum
- Dulumoon in Province of Davao del Sur, Davao
- Duluquin in Province of Zamboanga del Norte, Zamboanga Peninsula
- Guin-ansan in Province of Samar, Eastern Visayas
- Guindologan River, a stream in Province of Masbate, Bicol
- Gutierez Cattle Ranch, a ranch
- Inoburen in Province of Sarangani, Soccsksargen
- Inogog in Province of Maguindanao, Autonomous Region in Muslim Mindanao
- Kaguingkingan in Southern Leyte, Eastern Visayas
- Kagumay in Province of Leyte, Eastern Visayas
- Kahinaud Point, a point in Province of Surigao del Norte, Caraga
- Keybalis River, a stream in Province of Sarangani, Soccsksargen
- Ladol in Davao
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- Lagum River, a stream in Compostela, Davao
- Lubuk Bay, a bay in Province of Tawi-Tawi, Autonomous Region in Muslim Mindanao
- Mabua, population 2,075 in Province of Surigao del Norte, Caraga
- Mabua Creek, a stream in Province of Negros Occidental, Western Visayas
- Malimono in Malimono, Province of Surigao del Norte, Caraga
- Malimpak in Province of Davao del Sur, Davao
- Mangagoy in Province of Surigao del Sur, Caraga
- Mara in Davao
- Marga River, a stream in Province of Surigao del Sur, Caraga
- Margaja in Province of Masbate, Bicol
- Mauo River, a stream in Northern Samar, Eastern Visayas
- Monte Suerte in Province of Bohol, Central Visayas
- Monte Sunting in Province of Bohol, Central Visayas
- Monte Video in Province of Bohol, Central Visayas
- Montevista, population 10,147 in Montevista, Province of Davao del Norte, Davao
- Mount Bontoc, a hill in Province of Guimaras, Western Visayas
- Mount Kagran, a hill in Province of Masbate, Bicol
- Mount Kalapi, a hill in Province of Davao del Sur, Davao
- Pagatpat in Province of Sulu, Autonomous Region in Muslim Mindanao
- Panadtaran in Province of Cebu, Central Visayas
- Panag in Province of North Cotabato, Soccsksargen
- Pepitas Rocks, a rock in Province of Iloilo, Western Visayas
- Pequeno
- Perez in Province of North Cotabato, Soccsksargen
- Perez Hill, a hill in Province of Maguindanao, Autonomous Region in Muslim Mindanao
- Pinan Hill, a hill in Province of Sulu, Autonomous Region in Muslim Mindanao
- Poelon in Southern Leyte, Eastern Visayas
- Port Santa Maria, a bay in Province of Zamboanga del Norte, Zamboanga Peninsula
- Putian River, a stream in Province of Negros Oriental, Central Visayas
- Sacramento Rock, a rock in Province of Negros Occidental, Western Visayas
- Samuro Point, a cape in Northern Samar, Eastern Visayas
- Satan Rock, a rock in Province of Surigao del Norte, Caraga
- Sinamgaban River, a stream in Province of Masbate, Bicol
- Sulangan in Province of Iloilo, Western Visayas
- Tagasaka in Province of Surigao del Sur, Caraga
- Taluk River, a stream in Province of Sarangani, Soccsksargen
- Talukanga in Province of Davao del Sur, Davao
- Tibo Hill, a hill in Province of Sarangani, Soccsksargen
- Tinaclipan River, a stream in Province of Masbate, Bicol
- Yungum River, a stream in Province of Maguindanao, Autonomous Region in Muslim Mindanao
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