- Agojo Point, a point in Eastern Samar, Eastern Visayas
- Amaga, population 2,230 in Province of Surigao del Sur, Caraga
- Bacao River, a stream in Province of Samar, Eastern Visayas
- Baguhan in Province of Bohol, Central Visayas
- Baris in Province of Masbate, Bicol
- Barobodiongan in Northern Samar, Eastern Visayas
- Bawang in Province of Leyte, Eastern Visayas
- Bawi in Province of Sarangani, Soccsksargen
- Boak in Southern Leyte, Eastern Visayas
- Bogotban in Province of Negros Occidental, Western Visayas
- Bogsokan in Province of Surigao del Sur, Caraga
- Buayan River, a stream
- Butulan, population 2,436 in Province of Davao del Sur, Davao
- Butulan Bay, a cove in Province of Davao del Sur, Davao
- Butulan River, a stream in Province of Davao del Sur, Davao
- Buug, population 8,558 in Province of Zamboanga del Sur, Zamboanga Peninsula
- Cabonga-an in Province of Cebu, Central Visayas
- Calowehawan River, a stream in Northern Samar, Eastern Visayas
- Camalobalo, population 2,539 in Province of Negros Occidental, Western Visayas
- Camambanan in Province of Samar, Eastern Visayas
- Camambugan in Province of Iloilo, Western Visayas
- Cangmangao in Province of Bohol, Central Visayas
- Conloterio in Eastern Samar, Eastern Visayas
- Conmonos in Province of Negros Occidental, Western Visayas
- Darol-Gambangan in Province of Sulu, Autonomous Region in Muslim Mindanao
- Ectortopos in Province of Surigao del Norte, Caraga
- Gapas in Province of Sulu, Autonomous Region in Muslim Mindanao
- Gapet in Province of Maguindanao, Autonomous Region in Muslim Mindanao
- Guimbalaon
- Hilongos River, a stream in Province of Leyte, Eastern Visayas
- Hilosig River, a stream in Province of Leyte, Eastern Visayas
- Iloilo Strait, a strait in Province of Iloilo, Western Visayas
- Ilom in Province of Cebu, Central Visayas
- Ilongbuquid in Province of Iloilo, Western Visayas
- Kamasy in Province of Maguindanao, Autonomous Region in Muslim Mindanao
- Kamaunggi in Province of Sulu, Autonomous Region in Muslim Mindanao
- Kamawi in Province of Sulu, Autonomous Region in Muslim Mindanao
- Kamawi Gamay in Province of Sulu, Autonomous Region in Muslim Mindanao
- Kilkilan River, a stream in Province of Bohol, Central Visayas
- Laguisi
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- Laguitan in Province of Maguindanao, Autonomous Region in Muslim Mindanao
- Lake Mantohod, a lake in Province of Negros Oriental, Central Visayas
- Libua in Province of Sultan Kudarat, Soccsksargen
- Libuak in Province of Davao del Norte, Davao
- Libuao in Province of Surigao del Norte, Caraga
- Macaonan Point, a point in Province of Davao Oriental, Davao
- Magallanes Creek, a stream in Province of Davao del Sur, Davao
- Magpalaway Creek, a stream in Compostela, Davao
- Mahagbu in Province of Bohol, Central Visayas
- Mahala, population 2,427 in Province of Sulu, Autonomous Region in Muslim Mindanao
- Managuit in Province of Iloilo, Western Visayas
- Manahao in Northern Samar, Eastern Visayas
- Manajao in Northern Samar, Eastern Visayas
- Manajao River, a stream in Northern Samar, Eastern Visayas
- Manaybanay Stream, a stream in Northern Samar, Eastern Visayas
- Mantolongan in Province of Negros Occidental, Western Visayas
- Masgad in Province of Surigao del Norte, Caraga
- Masgad Creek, a stream in Province of Surigao del Norte, Caraga
- Matobato in Province of Masbate, Bicol
- Mount Gapas, a mountain in Province of Sulu, Autonomous Region in Muslim Mindanao
- New Bohol, population 3,749 in Province of Davao del Norte, Davao
- Palalo River, a stream in Province of Samar, Eastern Visayas
- Pancil in Province of Cebu, Central Visayas
- Paz in Province of Cebu, Central Visayas
- Pintatagan in Province of Davao Oriental, Davao
- Pintatagan River, a stream in Province of Davao del Norte, Davao
- Sacamalig Bay, a bay in Northern Samar, Eastern Visayas
- San Agustin in Province of Leyte, Eastern Visayas
- San Isidro in San Isidro, Province of Bohol, Central Visayas
- Siniba-an in Province of Iloilo, Western Visayas
- Talao in Province of Davao del Sur, Davao
- Tanawan in Southern Leyte, Eastern Visayas
- Taytay in Province of Bohol, Central Visayas
- Tibigan, population 11,262 in Province of Bohol, Central Visayas
- Tinapa in Province of Zamboanga del Sur, Zamboanga Peninsula
- Tinapian in Province of Masbate, Bicol
- Tubig Maasin in Province of Sulu, Autonomous Region in Muslim Mindanao
- Tubig Nanok in Province of Sulu, Autonomous Region in Muslim Mindanao
- Vivi in Province of North Cotabato, Soccsksargen
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