- Ajuy, population 8,695 in Ajuy, Province of Iloilo, Western Visayas
- Ajuy Bay, a bay in Province of Iloilo, Western Visayas
- Ajuy River, a stream in Province of Iloilo, Western Visayas
- Ajuz in Province of Iloilo, Western Visayas
- Akbual in Province of Sarangani, Soccsksargen
- Bagnusan Hill, a hill in Province of Davao del Sur, Davao
- Bali in Province of Zamboanga del Norte, Zamboanga Peninsula
- Baliki in Province of North Cotabato, Soccsksargen
- Balila in Province of Cebu, Central Visayas
- Balili in Province of Zamboanga del Norte, Zamboanga Peninsula
- Bata-Bata Buanza in Province of Sulu, Autonomous Region in Muslim Mindanao
- Bobon in Province of Surigao del Sur, Caraga
- Bonacan in Province of Bohol, Central Visayas
- Bunal-Bunai in Province of Tawi-Tawi, Autonomous Region in Muslim Mindanao
- Bunason Creek, a stream in Province of Surigao del Norte, Caraga
- Bunat in Province of Sulu, Autonomous Region in Muslim Mindanao
- Bunyasan in Province of Surigao del Norte, Caraga
- Cagsasalang in Eastern Samar, Eastern Visayas
- Canguming in Province of Bohol, Central Visayas
- Cangyco in Province of Masbate, Bicol
- Canhandog Creek, a stream in Province of Masbate, Bicol
- Canhangdon in Province of Bohol, Central Visayas
- Canhauay in Eastern Samar, Eastern Visayas
- Canhayupon in Province of Bohol, Central Visayas
- Casanayan Junction in Province of Capiz, Western Visayas
- Clara in Province of Cebu, Central Visayas
- Clarin, population 3,200 in Clarin, Province of Bohol, Central Visayas
- Dapdap in Province of Masbate, Bicol
- Dapdap Hill, a hill in Province of Negros Occidental, Western Visayas
- Dapdar Rocks, a rock in Province of Samar, Eastern Visayas
- Esconchada Point, a point in Province of Surigao del Norte, Caraga
- Eseo Bank, a bank in Province of Sulu, Autonomous Region in Muslim Mindanao
- Esmeralda Hacienda
- Hacienda Conchita in Province of Negros Occidental, Western Visayas
- Hacienda Cubay
- Hangtud River, a stream in Northern Samar, Eastern Visayas
- Jaro River, a stream
- Jazimines in Province of Samar, Eastern Visayas
- Kabakungan Hill, a hill in Province of Davao del Sur, Davao
- Kalangkangan Hill, a hill in Province of Davao del Sur, Davao
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- Kawayon Hill, a hill in Province of Davao del Sur, Davao
- Kula Kula Channel, a marine channel in Province of Tawi-Tawi, Autonomous Region in Muslim Mindanao
- Kulabtingon in Province of Cebu, Central Visayas
- Kulagsing in Province of Davao del Sur, Davao
- Kulaman, population 3,380 in Province of Sultan Kudarat, Soccsksargen
- Kulungan Point, a cape in Province of Davao del Sur, Davao
- Lanturi Hill, a hill in Province of Davao del Sur, Davao
- Libas in Eastern Samar, Eastern Visayas
- Lubo Hill, a hill in Province of Davao del Sur, Davao
- Malahog
- Malalag Hill, a hill in Province of Davao del Sur, Davao
- Malandag Plateau, a plateau in Province of Sarangani, Soccsksargen
- Mantayopan in Province of Cebu, Central Visayas
- Mantaza in Province of Guimaras, Western Visayas
- Manteo Creek, a stream
- Manticaan in Province of Masbate, Bicol
- Mileb, population 2,758 in Province of Maguindanao, Autonomous Region in Muslim Mindanao
- Millan in Province of Iloilo, Western Visayas
- Mount Put, a hill in Province of Sulu, Autonomous Region in Muslim Mindanao
- Mskinley Range, a hill in Province of Davao del Sur, Davao
- Natubungan in Province of Negros Occidental, Western Visayas
- Natubungan Creek, a stream in Province of Negros Occidental, Western Visayas
- Nauhan Ridge, a ridge in Province of Negros Occidental, Western Visayas
- Palasa-ron in Province of Negros Occidental, Western Visayas
- Pualas in Province of Maguindanao, Autonomous Region in Muslim Mindanao
- Puganoh Hill, a hill in Province of Davao del Sur, Davao
- Salag in Province of Iloilo, Western Visayas
- Salagan River, a stream in Northern Samar, Eastern Visayas
- Salagmaya in Province of Cebu, Central Visayas
- Salakit in Province of Sarangani, Soccsksargen
- Santo Tomas
- Santos Lopez in Province of Iloilo, Western Visayas
- Talagutong Creek, a stream in Province of Davao del Sur, Davao
- Tiblawan, population 2,843 in Province of Davao Oriental, Davao
- Tiblawan Creek, a stream in Province of Davao Oriental, Davao
- Tungay in Province of Iloilo, Western Visayas
- Tungbanghan Point, a point in Province of Tawi-Tawi, Autonomous Region in Muslim Mindanao
- Tungbukan Island, an island in Province of Tawi-Tawi, Autonomous Region in Muslim Mindanao
- Yate-Tungga in Province of Sulu, Autonomous Region in Muslim Mindanao
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